Kossida, Sophia A.: search on Z-Library

The world's largest scientific articles store. 70,000,000+ articles for free.

Don't use scam websites

1

Bioinformatics by Example: From Sequence to Target

Kossida, Sophia, Tahri, Nadia, Daizadeh, Iraj

Journal:

Journal of Chemical Education

Year:

2002

Language:

english

File:

PDF, 537 KB

english, 2002

2

[IEEE 2009 16th International Conference on Systems, Signals and Image Processing - Chalkida, Greece (2009.06.18-2009.06.20)] 2009 16th International Conference on Systems, Signals and Image Processing - Applying Graph Theory on Protein - Protein Interaction Data

Moschopoulos, Charalampos, Likothanassis, Spiridon, Stamatopoulos, Vasileios G., Kossida, Sophia

Year:

2009

Language:

english

File:

PDF, 176 KB

english, 2009

3

Proteomics-driven progress in neurodegeneration research

Michael Fountoulakis, Sophia Kossida

Journal:

ELECTROPHORESIS

Year:

2006

Language:

english

File:

PDF, 302 KB

english, 2006

4

Compositional perspectives on human brain aging

Stilianos Arhondakis, Sophia Kossida

Journal:

Year:

2011

Language:

english

File:

PDF, 496 KB

english, 2011

5

Sample preparation and bioinformatics in MALDI profiling of urinary proteins

Panagiotis Zerefos, Julien Prados, Sophia Kossida, Alexandros Kalousis, Antonia Vlahou

Journal:

Journal of Chromatography B

Year:

2007

Language:

english

File:

PDF, 1.76 MB

english, 2007

6

Noise reduction in protein-protein interaction graphs by the implementation of a novel weighting scheme

George D Kritikos, Charalampos Moschopoulos, Michalis Vazirgiannis, Sophia Kossida

Journal:

BMC Bioinformatics

Year:

2011

Language:

english

File:

PDF, 852 KB

english, 2011

7

Protein functional links inTrypanosoma brucei, identified by gene fusion analysis

Dimitris Dimitriadis, V Lila Koumandou, Philip Trimpalis, Sophia Kossida

Journal:

BMC Evolutionary Biology

Year:

2011

Language:

english

File:

PDF, 6.65 MB

english, 2011

8

Transcriptome map of mouse isochores

Stilianos Arhondakis, Kimon Frousios, Costas S Iliopoulos, Solon P Pissis, German Tischler, Sophia Kossida

Journal:

Year:

2011

Language:

english

File:

PDF, 244 KB

english, 2011

9

Using graph theory to analyze biological networks

Georgios A Pavlopoulos, Maria Secrier, Charalampos N Moschopoulos, Theodoros G Soldatos, Sophia Kossida, Jan Aerts, Reinhard Schneider, Pantelis G Bagos

Journal:

Year:

2011

Language:

english

File:

PDF, 2.22 MB

english, 2011

10

Characterization of the human urine proteome by preparative electrophoresis in combination with 2-DE

Panagiotis G. Zerefos, Konstantinos Vougas, Ploumisti Dimitraki, Sophia Kossida, Andreas Petrolekas, Konstantinos Stravodimos, Aris Giannopoulos, Michael Fountoulakis, Antonia Vlahou

Journal:

Year:

2006

Language:

english

File:

PDF, 420 KB

english, 2006

11

Lack of Evidence for Cospeciation Between Retroelements and Their Hosts

Sophia Kossida, Paul H. Harvey, Paolo M. de A. Zanotto, Michael A. Charleston

Journal:

Journal of Molecular Evolution

Year:

2000

Language:

english

File:

PDF, 1.03 MB

english, 2000

12

The genomic structure of C14orf1 is conserved across eukarya

Chris Ottolenghi, Iraj Daizadeh, Albert Ju, Sophia Kossida, Georges Renault, Michel Jacquet, Arlette Fellous, Walter Gilbert, Reiner Veitia

Journal:

Mammalian Genome

Year:

2000

Language:

english

File:

PDF, 479 KB

english, 2000

13

Sp1 binds to the external promoter of the p73 gene and induces the expression of TAp73γ in lung cancer

Stella Logotheti, Ioannis Michalopoulos, Maria Sideridou, Alexandros Daskalos, Sophia Kossida, Demetrios A. Spandidos, John K. Field, Borek Vojtesek, Triantafyllos Liloglou, Vassilis Gorgoulis, Vassil

Journal:

Year:

2010

Language:

english

File:

PDF, 2.10 MB

english, 2010

14

Analysis of Secreted Proteins for the Study of Bladder Cancer Cell Aggressiveness

Makridakis, Manousos, Roubelakis, Maria G., Bitsika, Vasiliki, Dimuccio, Veronica, Samiotaki, Martina, Kossida, Sophia, Panayotou, George, Coleman, Jonathan, Candiano, Giovanni, Anagnou, Nikolaos P.

Journal:

Journal of Proteome Research

Year:

2010

Language:

english

File:

PDF, 1.16 MB

english, 2010

15

The THAP domain: a novel protein motif with similarity to the DNA-binding domain of P element transposase

Myriam Roussigne, Sophia Kossida, Anne-Claire Lavigne, Thomas Clouaire, Vincent Ecochard, Alexandra Glories, François Amalric, Jean-Philippe Girard

Journal:

Trends in Biochemical Sciences

Year:

2003

Language:

english

File:

PDF, 391 KB

english, 2003

16

GIBA: a clustering tool for detecting protein complexes

Charalampos N Moschopoulos, Georgios A Pavlopoulos, Reinhard Schneider, Spiridon D Likothanassis, Sophia Kossida

Journal:

BMC Bioinformatics

Year:

2009

Language:

english

File:

PDF, 1.11 MB

english, 2009

17

The 20thanniversary of EMBnet: 20 years of bioinformatics for the Life Sciences community

Domenica D'Elia, Andreas Gisel, Nils-Einar Eriksson, Sophia Kossida, Kimmo Mattila, Lubos Klucar, Erik Bongcam-Rudloff

Journal:

BMC Bioinformatics

Year:

2009

Language:

english

File:

PDF, 246 KB

english, 2009

18

Human microRNA target analysis and gene ontology clustering by GOmir, a novel stand-alone application

Maria G Roubelakis, Pantelis Zotos, Georgios Papachristoudis, Ioannis Michalopoulos, Kalliopi I Pappa, Nicholas P Anagnou, Sophia Kossida

Journal:

BMC Bioinformatics

Year:

2009

Language:

english

File:

PDF, 966 KB

english, 2009

19

'Brukin2D': a 2D visualization and comparison tool for LC-MS data

Dimosthenis Tsagkrasoulis, Panagiotis Zerefos, George Loudos, Antonia Vlahou, Marc Baumann, Sophia Kossida

Journal:

BMC Bioinformatics

Year:

2009

Language:

english

File:

PDF, 913 KB

english, 2009

20

Phylogenetic and regulatory region analysis ofWnt5genes reveals conservation of a regulatory module with putative implication in pancreas development

Maria Kapasa, Stilianos Arhondakis, Sophia Kossida

Journal:

Year:

2010

Language:

english

File:

PDF, 1.72 MB

english, 2010

21

Molecular Cloning of SLC26A7, a Novel Member of the SLC26 Sulfate/Anion Transporter Family, from High Endothelial Venules and Kidney

Jean-Baptiste Vincourt, Denis Jullien, Sophia Kossida, François Amalric, Jean-Philippe Girard

Journal:

Year:

2002

Language:

english

File:

PDF, 1.35 MB

english, 2002

22

Everolimus suppresses cancellous bone loss, bone resorption, and cathepsin K expression by osteoclasts

Michaela Kneissel, Ngoc-Hong Luong-Nguyen, Myma Baptist, Reto Cortesi, Sabine Zumstein-Mecker, Sophia Kossida, Terry O'Reilly, Heidi Lane, Mira Susa

Journal:

Year:

2004

Language:

english

File:

PDF, 864 KB

english, 2004

23

Fusion methodologies for biomedical data

Georgia Tsiliki, Sophia Kossida

Journal:

Journal of Proteomics

Year:

2011

Language:

english

File:

PDF, 605 KB

english, 2011

24

Plant cytosine-5 DNA methyltransferases: Structure, function, and molecular evolution

Athanasia Pavlopoulou, Sophia Kossida

Journal:

Year:

2007

Language:

english

File:

PDF, 1.02 MB

english, 2007

25

Phylogenetic analysis of the eukaryotic RNA (cytosine-5)-methyltransferases

Athanasia Pavlopoulou, Sophia Kossida

Journal:

Year:

2009

Language:

english

File:

PDF, 1.23 MB

english, 2009

26

Towards the elucidation of the regulatory network guiding the insulin producing cells’ differentiation

Maria Kapasa, Dimitrios Vlachakis, Myrto Kostadima, Georgia Sotiropoulou, Sophia Kossida

Journal:

Year:

2012

Language:

english

File:

PDF, 933 KB

english, 2012

27

Which clustering algorithm is better for predicting protein complexes?

Charalampos N Moschopoulos, Georgios A Pavlopoulos, Ernesto Iacucci, Jan Aerts, Spiridon Likothanassis, Reinhard Schneider, Sophia Kossida

Journal:

BMC Research Notes

Year:

2011

Language:

english

File:

PDF, 259 KB

english, 2011

28

Human gene correlation analysis (HGCA): A tool for the identification of transcriptionally co-expressed genes

Ioannis Michalopoulos, Georgios A Pavlopoulos, Apostolos Malatras, Alexandros Karelas, Myrto-Areti Kostadima, Reinhard Schneider, Sophia Kossida

Journal:

BMC Research Notes

Year:

2012

Language:

english

File:

PDF, 483 KB

english, 2012

29

GAPPI: IDENTIFYING IMPORTANT PROTEIN MODULES THROUGH PROTEIN-PROTEIN INTERACTION GRAPHS

MOSCHOPOULOS, CHARALAMPOS, FYTROS, MARIOS, ALATSATHIANOS, STAMATIS, LIKOTHANASSIS, SPIRIDON, KOSSIDA, SOPHIA

Journal:

International Journal of Artificial Intelligence Tools

Year:

2012

Language:

english

File:

PDF, 754 KB

english, 2012

30

Unraveling microalgal molecular interactions using evolutionary and structural bioinformatics

Vlachakis, Dimitrios, Pavlopoulou, Athanasia, Kazazi, Dorothea, Kossida, Sophia

Journal:

Year:

2013

Language:

english

File:

PDF, 1.24 MB

english, 2013

31

Search for Potential Markers for Prostate Cancer Diagnosis, Prognosis and Treatment in Clinical Tissue Specimens Using Amine-Specific Isobaric Tagging (iTRAQ) with Two-Dimensional Liquid Chromatography and Tandem Mass Spectrometry

Garbis, Spiros D., Tyritzis, Stavros I., Roumeliotis, Theodoros, Zerefos, Panagiotis, Giannopoulou, Eugenia G., Vlahou, Antonia, Kossida, Sophia, Diaz, Jose, Vourekas, Stavros, Tamvakopoulos, Constant

Journal:

Journal of Proteome Research

Year:

2008

Language:

english

File:

PDF, 5.67 MB

english, 2008

32

Transcriptome map of mouse isochores in embryonic and neonatal cortex

Frousios, Kimon, Iliopoulos, Costas S., Tischler, German, Kossida, Sophia, Pissis, Solon P., Arhondakis, Stilianos

Journal:

Year:

2013

Language:

english

File:

PDF, 440 KB

english, 2013

33

[IEEE 2010 10th IEEE International Conference on Information Technology and Applications in Biomedicine (ITAB 2010) - Corfu, Greece (2010.11.3-2010.11.5)] Proceedings of the 10th IEEE International Conference on Information Technology and Applications in Biomedicine - An Advanced Hierarchical algorithm for protein complex prediction

Moschopoulos, Charalampos, Theofilatos, Konstantinos, Fotakis, Dimitris, Likothanasis, Spiridon, Kossida, Sophia

Year:

2010

Language:

english

File:

PDF, 361 KB

english, 2010

34

[IEEE 2009 16th International Conference on Systems, Signals and Image Processing - Chalkida, Greece (2009.06.18-2009.06.20)] 2009 16th International Conference on Systems, Signals and Image Processing - Interpretation of Coherence Phase and Rhythmic Cumulant Results; A Simulation Study

Stamatopoulos, Vasileios G., Karras, Dimitrios A., Moschopoulos, Charalampos, Kossida, Sophia

Year:

2009

Language:

english

File:

PDF, 263 KB

english, 2009

35

Design, synthesis and application of benzyl-sulfonate biomimetic affinity adsorbents for monoclonal antibody purification from transgenic corn

Maltezos, Anastasios, Platis, Dimitris, Vlachakis, Dimitrios, Kossida, Sophia, Marinou, Marigianna, Labrou, Nikolaos E.

Journal:

Journal of Molecular Recognition

Year:

2014

Language:

english

File:

PDF, 4.21 MB

english, 2014

36

Frequent gene fissions associated with human pathogenic bacteria

Karamichali, Ioanna, Koumandou, V. Lila, Karagouni, Amalia D., Kossida, Sophia

Journal:

Year:

2014

Language:

english

File:

PDF, 1.32 MB

english, 2014

37

3D molecular modeling and evolutionary study of the Trypanosoma brucei DNA Topoisomerase IB, as a new emerging pharmacological target

Vlachakis, Dimitrios, Pavlopoulou, Athanasia, Roubelakis, Maria G., Feidakis, Christos, Anagnou, Nikolaos P., Kossida, Sophia

Journal:

Year:

2014

Language:

english

File:

PDF, 1.53 MB

english, 2014

38

[IEEE 2008 8th IEEE International Conference on Bioinformatics and BioEngineering (BIBE) - Athens, Greece (2008.10.8-2008.10.10)] 2008 8th IEEE International Conference on BioInformatics and BioEngineering - GOmir: A stand-alone application for human microRNA target analysis and gene ontology clustering

Zotos, Pantelis, Papachristoudis, Georgios, Roubelakis, Maria G., Michalopoulos, Ioannis, Pappa, Kalliopi I., Anagnou, Nikolaos P., Kossida, Sophia

Year:

2008

Language:

english

File:

PDF, 5.40 MB

english, 2008

39

[IEEE 2007 IEEE International Symposium on Signal Processing and Information Technology - Giza, Egypt (2007.12.15-2007.12.18)] 2007 IEEE International Symposium on Signal Processing and Information Technology - Use of the MPEG-4 ALS Architecture and Inter-channel Prediction for Multi-channel ECG Coding

Sgouros, Nicholas P., Constantinou, Ioannis P., Loudos, George K., Kossida, Sophia A.

Year:

2007

Language:

english

File:

PDF, 1.15 MB

english, 2007

40

[IEEE 2010 20th International Conference on Pattern Recognition (ICPR) - Istanbul, Turkey (2010.08.23-2010.08.26)] 2010 20th International Conference on Pattern Recognition - A Spot Segmentation Approach for 2D Gel Electrophoresis Images Based on 2D Histograms

Zacharia, Eleni, Kostopoulou, Eirini, Maroulis, Dimitris, Kossida, Sophia

Year:

2010

Language:

english

File:

PDF, 1.14 MB

english, 2010

41

A Data Mining Based Approach for Collaborative Analysis of Biomedical Data

Tsiliki, Georgia, Kossida, Sophia, Friesen, Natalja, Rüping, Stefan, Tzagarakis, Manolis, Karacapilidis, Nikos

Journal:

International Journal of Artificial Intelligence Tools

Year:

2014

Language:

english

File:

PDF, 1.06 MB

english, 2014

42

Deciphering the protein interaction in adhesion of Francisella tularensis subsp. holarctica to the endothelial cells

Bencurova, Elena, Kovac, Andrej, Pulzova, Lucia, Gyuranecz, Miklós, Mlynarcik, Patrik, Mucha, Rastislav, Vlachakis, Dimitrios, Kossida, Sophia, Flachbartova, Zuzana, Bhide, Mangesh

Journal:

Microbial Pathogenesis

Year:

2015

Language:

english

File:

PDF, 2.14 MB

english, 2015

43

3D Molecular Modelling Study of the H7N9 RNA-Dependent RNA Polymerase as an Emerging Pharmacological Target

Vlachakis, Dimitrios, Karozou, Argiro, Kossida, Sophia

Journal:

Influenza Research and Treatment

Year:

2013

Language:

english

File:

PDF, 3.08 MB

english, 2013

44

Antiviral Stratagems Against HIV-1 Using RNA Interference (RNAi) Technology

Kossida, Sophia, Vlachakis, Dimitrios, Tsiliki, Georgia, Pavlopoulou, Athanasia, Roubelakis, Maria, Champeris Tsaniras, Spyridon

Journal:

Evolutionary Bioinformatics

Year:

2013

Language:

english

File:

PDF, 451 KB

english, 2013

45

SAFE Software and FED Database to Uncover Protein-Protein Interactions using Gene Fusion Analysis

Kossida, Sophia, Dimosthenis Tsagrasoulis,, Vasilis Danos,, Maria Kissa,, Philip Trimpalis,, Koumandou, Lila, Amalia D. Karagouni,, Athanasios Tsakalidis,, Kossida, Sophia

Journal:

Evolutionary Bioinformatics

Year:

2011

Language:

english

File:

PDF, 3.36 MB

english, 2011

46

Computational Methods and Algorithms for Mass-Spectrometry Based Differential Proteomics

Mavroudi, Seferina, Papadimitriou, Stergios, Kossida, Sophia, Likothanassis, Spyridon, Vlahou, Antonia

Journal:

Current Proteomics

Year:

2007

Language:

english

File:

PDF, 275 KB

english, 2007

47

Evolution of the F0F1 ATP Synthase Complex in Light of the Patchy Distribution of Different Bioenergetic Pathways across Prokaryotes

Koumandou, Vassiliki Lila, Kossida, Sophia, Ouzounis, Christos A.

Journal:

PLoS Computational Biology

Year:

2014

Language:

english

File:

PDF, 1.69 MB

english, 2014

48

Overview of microRNA Target Analysis Tools

Zotos, Panteleimon, G. Roubelakis, Maria, P. Anagnou, Nicholas, Kossida, Sophia

Journal:

Current Bioinformatics

Year:

2012

Language:

english

File:

PDF, 998 KB

english, 2012

49

e-Herophilus: 24-hour personalised telecardiology services

Kastania, Anastasia N., Loudos, Georgios, Sgouros, Nicholas P., Constantinou, Ioannis, Vavatsioula, Maria, Boudoulas, Harisios, Kossida, Sophia

Journal:

International Journal of Electronic Healthcare

Year:

2010

Language:

english

File:

PDF, 982 KB

english, 2010

50

Analyzing Protein-Protein Interaction Networks with Web Tools

N. Moschopoulos, Charalampos, A. Pavlopoulos, Georgios, Likothanassis, Spiridon, Kossida, Sophia

Journal:

Current Bioinformatics

Year:

2011

Language:

english

File:

PDF, 793 KB

english, 2011